Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Liver
Cell type
Liver
MeSH Description
A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Attributes by original data submitter

Sample

source_name
Liver_H3K27me3
strain
C57BL/6
age
8-10 week old
tissue/cell type
whole liver
chip antibody
H3K27me3 (Abcam ab6002 lot 262866)

Sequenced DNA Library

library_name
GSM751034: H3K27me3_Liver_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
33952647
Reads aligned (%)
72.4
Duplicates removed (%)
11.6
Number of peaks
474 (qval < 1E-05)

mm9

Number of total reads
33952647
Reads aligned (%)
72.2
Duplicates removed (%)
11.6
Number of peaks
582 (qval < 1E-05)

Base call quality data from DBCLS SRA