Antigen

Antigen Class

TFs and others

Antigen

CTCF

Cell type

Cell type Class

Others

Cell type

WERI-Rb-1

Primary Tissue

Eye

Tissue Diagnosis

Retinoblastoma

Sample

source_name

WERI-Rb-1

biomaterial_provider

ATCC

cell

WERI-Rb-1

cell organism

Human

cell description

retinoblastoma (PMID: 844036)

cell sex

F

antibody

CTCF

antibody description

rabbit polyclonal

antibody target description

CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.

antibody vendor name

Millipore

replicate

1

Sequenced DNA Library

library_name

GSM749768: Stam_WERI-Rb-1_CTCF_1

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

22744935

Reads aligned (%)

64.7

Duplicates removed (%)

13.3

Number of peaks

58107 (qval < 1E-05)

hg19

Number of total reads

22744935

Reads aligned (%)

64.4

Duplicates removed (%)

13.9

Number of peaks

58042 (qval < 1E-05)