SRX080181
GSM747548: ES PolII ChIPseq rep2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
ES_PolII_ChIPseq
strain
Mixed (129-C57Bl/6)
cell type
Embryonic stem cells
genotype/variation
wild type
chip antibody
anti-PolII(N20) (SantaCruz #sc-899)

Sequenced DNA Library

library_name
GSM747548: ES_PolII_ChIPseq_rep2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
41746797
Reads aligned (%)
83.1
Duplicates removed (%)
75.8
Number of peaks
9760 (qval < 1E-05)

mm9

Number of total reads
41746797
Reads aligned (%)
83.0
Duplicates removed (%)
76.0
Number of peaks
9783 (qval < 1E-05)

Base call quality data from DBCLS SRA