Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Blood

Cell type

GM12878

Tissue

blood

Lineage

mesoderm

Description

B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus

Sample

source_name

GM12878_INPUT

biomaterial_provider

GM12878

cell line

GM12878

cell type

lymphoblastoid cells

Sequenced DNA Library

library_name

GSM748530: GM12878_INPUT

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer

hg38

Number of total reads

16954037

Reads aligned (%)

97.0

Duplicates removed (%)

6.3

Number of peaks

492 (qval < 1E-05)

hg19

Number of total reads

16954037

Reads aligned (%)

96.0

Duplicates removed (%)

7.3

Number of peaks

711 (qval < 1E-05)