SRX080102
GSM749413: pGES-1 HPL-2 YL416 3-4-10 L1 rep1 GFP ACGT

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
hpl-2

Cell type

Cell type Class
Larvae
Cell type
L1
NA
NA

Attributes by original data submitter

Sample

source_name
pGES-1 HPL-2:GFP:FLAG whole animal
strain
YL416
Stage
L1
chip antibody
GFP

Sequenced DNA Library

library_name
GSM749413: pGES-1 _HPL-2_YL416_3-4-10_L1_rep1_GFP_ACGT
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads
6275526
Reads aligned (%)
92.5
Duplicates removed (%)
13.7
Number of peaks
4603 (qval < 1E-05)

ce10

Number of total reads
6275526
Reads aligned (%)
92.4
Duplicates removed (%)
13.7
Number of peaks
4611 (qval < 1E-05)

Base call quality data from DBCLS SRA