SRX080089
GSM749400: Plin-35 LIN-35 YL409 4-12-10 L1 rep2 Input CATT

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Larvae
Cell type
L1
NA
NA

Attributes by original data submitter

Sample

source_name
Plin-35_LIN-35:GFP:FLAG whole animal
strain
YL409
Stage
L1
chip antibody
None

Sequenced DNA Library

library_name
GSM749400: Plin-35_LIN-35_YL409_4-12-10_L1_rep2_Input_CATT
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads
3503602
Reads aligned (%)
58.5
Duplicates removed (%)
29.6
Number of peaks
110 (qval < 1E-05)

ce10

Number of total reads
3503602
Reads aligned (%)
58.5
Duplicates removed (%)
29.6
Number of peaks
109 (qval < 1E-05)

Base call quality data from DBCLS SRA