SRX080075
GSM749386: Pmex-5 LIN-35 YL468 10 18 10 yAd rep2 Input CATT

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Adult
Cell type
Young adult
NA
NA

Attributes by original data submitter

Sample

source_name
Pmex-5 LIN-35:GFP:FLAG whole animal
strain
YL468
Stage
Young adult
chip antibody
None

Sequenced DNA Library

library_name
GSM749386: Pmex-5_LIN-35_YL468_10_18_10_yAd_rep2_Input_CATT
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads
5790992
Reads aligned (%)
77.1
Duplicates removed (%)
5.6
Number of peaks
406 (qval < 1E-05)

ce10

Number of total reads
5790992
Reads aligned (%)
77.1
Duplicates removed (%)
5.6
Number of peaks
403 (qval < 1E-05)

Base call quality data from DBCLS SRA