SRX080044
GSM749521: Nlalll AML NAseq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Blood
Cell type
Acute myeloid leukemia
NA
NA

Attributes by original data submitter

Sample

source_name
AML patient cells (leukemic), untreated, NlaIII NA-Seq
cell type
leukemic cells
disease state
acute myeloid leukemia (AML)
treatment
none
restriction enzyme
NlaIII (R0125L)

Sequenced DNA Library

library_name
GSM749521: Nlalll_AML_NAseq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
6040123
Reads aligned (%)
96.1
Duplicates removed (%)
28.1
Number of peaks
1 (qval < 1E-05)

hg19

Number of total reads
6040123
Reads aligned (%)
95.8
Duplicates removed (%)
28.3
Number of peaks
1 (qval < 1E-05)

Base call quality data from DBCLS SRA