SRX080034
GSM749511: Nlalll untreated duplo NAseq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Blood
Cell type
NB-4
Primary Tissue
Blood
Site of Extraction
Bone Marrow
Tissue Diagnosis
Leukemia

Attributes by original data submitter

Sample

source_name
NB4 cells (leukemic), untreated, NlaIII NA-Seq
cell line
NB4
cell type
leukemic cells
treatment
none
restriction enzyme
NlaIII (R0125L)

Sequenced DNA Library

library_name
GSM749511: Nlalll_untreated_duplo_NAseq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
25513467
Reads aligned (%)
99.3
Duplicates removed (%)
54.1
Number of peaks
1 (qval < 1E-05)

hg19

Number of total reads
25513467
Reads aligned (%)
99.1
Duplicates removed (%)
54.3
Number of peaks
1 (qval < 1E-05)

Base call quality data from DBCLS SRA