SRX077931
GSM742286: H3K27me3 ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Embryo
Cell type
Embryonic heart
NA
NA

Attributes by original data submitter

Sample

source_name
E12.5 heart apex. 120 hearts
age
E12.5
tissue
heart apex
chip antibody
H3K27me3

Sequenced DNA Library

library_name
GSM742286: H3K27me3 ChIP-Seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
21638473
Reads aligned (%)
96.7
Duplicates removed (%)
30.3
Number of peaks
529 (qval < 1E-05)

mm9

Number of total reads
21638473
Reads aligned (%)
96.5
Duplicates removed (%)
30.5
Number of peaks
510 (qval < 1E-05)

Base call quality data from DBCLS SRA