SRX070880
GSM730705: input

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Cardiovascular
Cell type
HUVEC
Primary Tissue
Umbilical Cord
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
control input sample
cell-type
umbilical vein endothelial cells
passage
01/22/2010

Sequenced DNA Library

library_name
GSM730705: input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
57034730
Reads aligned (%)
98.7
Duplicates removed (%)
8.8
Number of peaks
1399 (qval < 1E-05)

hg19

Number of total reads
57034730
Reads aligned (%)
97.9
Duplicates removed (%)
10.2
Number of peaks
1582 (qval < 1E-05)

Base call quality data from DBCLS SRA