Antigen

Antigen Class

DNase-seq

Antigen

DNase-Seq

Cell type

Cell type Class

Epidermis

Cell type

AG10803

Tissue

skin

Description

abdominal skin fibroblasts from apparently heathly 22 year old, "8% of the cells examined showing random chromosome loss, 2% showing random chromosome gain, and 2% showing 69,XYY" -Coriell

Sample

source_name

AG10803

biomaterial_provider

AG10803

cell

AG10803

cell organism

Human

cell description

Adult human abdominal skin fibroblasts

cell lineage

mesoderm

cell sex

M

replicate

2

Sequenced DNA Library

library_name

GSM736633: Stam_AG10803_2

library_strategy

DNase-Hypersensitivity

library_source

GENOMIC

library_selection

DNase

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

48864430

Reads aligned (%)

95.0

Duplicates removed (%)

47.6

Number of peaks

117071 (qval < 1E-05)

hg19

Number of total reads

48864430

Reads aligned (%)

94.6

Duplicates removed (%)

48.8

Number of peaks

116902 (qval < 1E-05)