Sample information curated by ChIP-Atlas

Antigen

Antigen Class
DNase-seq
Antigen
DNase-Seq

Cell type

Cell type Class
Cardiovascular
Cell type
HPAF
Tissue
blood vessel
Lineage
mesoderm
Description
pulmonary artery fibroblasts

Attributes by original data submitter

Sample

source_name
HPAF
biomaterial_provider
ScienCell
cell
HPAF
cell organism
Human
cell description
Human Pulmonary Artery Fibroblasts
cell sex
U
replicate
2

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
39421506
Reads aligned (%)
95.5
Duplicates removed (%)
39.6
Number of peaks
103759 (qval < 1E-05)

hg19

Number of total reads
39421506
Reads aligned (%)
95.0
Duplicates removed (%)
41.0
Number of peaks
108225 (qval < 1E-05)

Base call quality data from DBCLS SRA