Antigen

Antigen Class

TFs and others

Antigen

Runx1

Cell type

Cell type Class

Pluripotent stem cell

Cell type

mESCs, differentiated

NA

NA

Sample

source_name

FACS-sorted day 6 differentiated ES cells, Runx1+/VE-cadherin+/CD41-, Runx1 ChIP

cell line

Runx1(Venus/+) ES cell line

cell type

differentiated ES cells

days of differentiation

6

cell subpopulation

Runx1+/VE-cadherin+/CD41-

chip antibody

anti-Runx1

antibody vendor

Abcam

antibody catalog number

ab23980-100

antibody lot number

I58136

Sequenced DNA Library

library_name

GSM730631: Runx1+/VE-cadherin+/CD41-, ChIP-seq

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

mm10

Number of total reads

17812663

Reads aligned (%)

95.1

Duplicates removed (%)

8.8

Number of peaks

423 (qval < 1E-05)

mm9

Number of total reads

17812663

Reads aligned (%)

95.0

Duplicates removed (%)

9.0

Number of peaks

481 (qval < 1E-05)