SRX063957
GSM727906: H3K4me3

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Larvae
Cell type
L3
NA
NA

Attributes by original data submitter

Sample

source_name
L3 embyros
strain
N2
developmental stage
L3
chip antibody
H3K4me3

Sequenced DNA Library

library_name
GSM727906: H3K4me3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads
25891064
Reads aligned (%)
82.7
Duplicates removed (%)
21.4
Number of peaks
5384 (qval < 1E-05)

ce10

Number of total reads
25891064
Reads aligned (%)
82.7
Duplicates removed (%)
21.4
Number of peaks
5382 (qval < 1E-05)

Base call quality data from DBCLS SRA