SRX063288
GSM721528: KMS11 H3K36me2 rep2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K36me2

Cell type

Cell type Class
Blood
Cell type
KMS-11
Primary Tissue
Blood
Tissue Diagnosis
Multiple Myeloma

Attributes by original data submitter

Sample

source_name
KMS11_H3K36me2_rep2
cell line
KMS11
tissue type
blood
genotype/variation
t(4;14)(q16.3;q32.3)
gender
female
chip antibody
anti-H3K36me2
chip antibody vendor
Active Motif

Sequenced DNA Library

library_name
GSM721528: KMS11_H3K36me2_rep2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
16231847
Reads aligned (%)
97.6
Duplicates removed (%)
47.7
Number of peaks
844 (qval < 1E-05)

hg19

Number of total reads
16231847
Reads aligned (%)
97.3
Duplicates removed (%)
48.0
Number of peaks
858 (qval < 1E-05)

Base call quality data from DBCLS SRA