Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Liver
Cell type
Liver
MeSH Description
A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Attributes by original data submitter

Sample

source_name
Mouse liver
strain
C57BL/6
chip antibody
Pol2
chip antibody details
Canvance, MMS-126R

Sequenced DNA Library

library_name
GSM722763: RenLab-Pol2-liver
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
28873360
Reads aligned (%)
69.4
Duplicates removed (%)
18.4
Number of peaks
14200 (qval < 1E-05)

mm9

Number of total reads
28873360
Reads aligned (%)
69.2
Duplicates removed (%)
18.5
Number of peaks
14313 (qval < 1E-05)

Base call quality data from DBCLS SRA