SRX062958
GSM722696: RenLab-Pol2-heart

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Cardiovascular
Cell type
Heart
MeSH Description
The hollow, muscular organ that maintains the circulation of the blood.

Attributes by original data submitter

Sample

source_name
Mouse heart
strain
C57BL/6
chip antibody
Pol2
chip antibody details
Canvance, MMS-126R

Sequenced DNA Library

library_name
GSM722696: RenLab-Pol2-heart
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
39518064
Reads aligned (%)
62.4
Duplicates removed (%)
16.3
Number of peaks
26644 (qval < 1E-05)

mm9

Number of total reads
39518064
Reads aligned (%)
62.3
Duplicates removed (%)
16.3
Number of peaks
26665 (qval < 1E-05)

Base call quality data from DBCLS SRA