SRX062942
GSM722634: RenLab-Pol2-cortex

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Neural
Cell type
Brain cortex
NA
NA

Attributes by original data submitter

Sample

source_name
Mouse cortex
strain
C57BL/6
chip antibody
Pol2
chip antibody details
Canvance, MMS-126R

Sequenced DNA Library

library_name
GSM722634: RenLab-Pol2-cortex
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
45568019
Reads aligned (%)
44.8
Duplicates removed (%)
17.1
Number of peaks
22766 (qval < 1E-05)

mm9

Number of total reads
45568019
Reads aligned (%)
44.7
Duplicates removed (%)
17.1
Number of peaks
22796 (qval < 1E-05)

Base call quality data from DBCLS SRA