SRX062346
GSM722715: DNasel HS t(8;21)#1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
DNase-seq
Antigen
DNase-Seq

Cell type

Cell type Class
Blood
Cell type
CD34+
NA
NA

Attributes by original data submitter

Sample

source_name
CD34+ cells from human patient with t(8:21)
cell type
AML patient bone marrow CD34+
target
DNasel HS
antibody
NA

Sequenced DNA Library

library_name
GSM722715: DNasel_HS_t(8;21)#1
library_strategy
DNase-Hypersensitivity
library_source
GENOMIC
library_selection
DNase

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
18338591
Reads aligned (%)
93.6
Duplicates removed (%)
38.9
Number of peaks
13718 (qval < 1E-05)

hg19

Number of total reads
18338591
Reads aligned (%)
93.0
Duplicates removed (%)
39.6
Number of peaks
13669 (qval < 1E-05)

Base call quality data from DBCLS SRA