SRX061985
GSM721224: H3K79me2 mLSC ChIPSeq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K79me2

Cell type

Cell type Class
Blood
Cell type
Granulocytic-monocytic progenitors
NA
NA

Attributes by original data submitter

Sample

source_name
murine L-GMP
strain
C57BL/6
genotype
MLL-AF9
cell origin
MLL-AF9 Leukemic Stem Cell (IL-7R-Lin-Sca-1-c-Kit+CD34+FcgammaII/III+) from GMP-derived leukemia
chip antibody
H3K79me2

Sequenced DNA Library

library_name
GSM721224: H3K79me2_mLSC_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
8436769
Reads aligned (%)
82.5
Duplicates removed (%)
2.7
Number of peaks
1102 (qval < 1E-05)

mm9

Number of total reads
8436769
Reads aligned (%)
82.4
Duplicates removed (%)
2.9
Number of peaks
1118 (qval < 1E-05)

Base call quality data from DBCLS SRA