Antigen

Antigen Class

DNase-seq

Antigen

DNase-Seq

Cell type

Cell type Class

Digestive tract

Cell type

Stomach

MeSH Description

An organ of digestion situated in the left upper quadrant of the abdomen between the termination of the ESOPHAGUS and the beginning of the DUODENUM.

Sample

MOLECULE

genomic DNA

DISEASE

None

BIOMATERIAL_PROVIDER

University of Washington, Congenital Defects Lab. Ian Glass

BIOMATERIAL_TYPE

Primary Tissue

TISSUE_TYPE

Fetal Stomach

TISSUE_DEPOT

UW

COLLECTION_METHOD

fetal

DONOR_ID

H-23964

DONOR_AGE

day 98

DONOR_HEALTH_STATUS

NA

DONOR_SEX

female

DONOR_ETHNICITY

NA

sample_term_id

UBERON_0000945

Sequenced DNA Library

library_name

DS17878

library_strategy

DNase-Hypersensitivity

library_source

GENOMIC

library_selection

DNase

Sequencing Platform

instrument_model

Illumina Genome Analyzer IIx

hg38

Number of total reads

38031203

Reads aligned (%)

95.1

Duplicates removed (%)

13.0

Number of peaks

70059 (qval < 1E-05)

hg19

Number of total reads

38031203

Reads aligned (%)

94.6

Duplicates removed (%)

13.8

Number of peaks

69644 (qval < 1E-05)