Antigen

Antigen Class

DNase-seq

Antigen

DNase-Seq

Cell type

Cell type Class

Blood

Cell type

CD3+

NA

NA

Sample

MOLECULE

genomic DNA

DISEASE

None

BIOMATERIAL_PROVIDER

FHCRC HEIMFELD

BIOMATERIAL_TYPE

Primary Cell

CELL_TYPE

CD3 Primary Cells

MARKERS

CD3+

DONOR_ID

RO 01701

DONOR_AGE

year 37

DONOR_HEALTH_STATUS

NA

DONOR_SEX

male

DONOR_ETHNICITY

Hispanic

PASSAGE_IF_EXPANDED

NA

sample_term_id

CL_0000084

Sequenced DNA Library

library_name

DS17534

library_strategy

DNase-Hypersensitivity

library_source

GENOMIC

library_selection

DNase

Sequencing Platform

instrument_model

Illumina Genome Analyzer IIx

hg38

Number of total reads

43290746

Reads aligned (%)

98.1

Duplicates removed (%)

13.3

Number of peaks

36926 (qval < 1E-05)

hg19

Number of total reads

43290746

Reads aligned (%)

97.5

Duplicates removed (%)

14.7

Number of peaks

36884 (qval < 1E-05)