Toggle navigation
ChIP-Atlas
Peak Browser
Target Genes
Colocalization
Enrichment Analysis
Publications
Docs
Advanced
Go
Find By ID
Visualize
Install and launch IGV before selecting data to visualize
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Error connecting to IGV?
Analyze
For dm3
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For dm6
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: Orc2
wikigenes
PDBj
CellType: Salivary glands
ATCC
MeSH
RIKEN BRC
SRX050606
GSM694132: SG Orc ChIP-Seq extraction1 seq1 aliquote 1
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
Orc2
Cell type
Cell type Class
Larvae
Cell type
Salivary glands
NA
NA
Attributes by original data submitter
Sample
source_name
SG Orc ChIP-Seq extraction1_seq1 channel_1
strain
SuUR - Orr-Weaver(official name : SuUR genotype : SuUR mutant outcross : 3 tags : Transposon tag : GFP description : SuUR mutant as maintained by the Orr-Weaver lab. made_by : Orr-Weaver )
tissue
salivary gland
developmental stage
L3 stage wandering larvae
genotype
SuUR mutant
Sequenced DNA Library
library_name
GSM694132: SG Orc ChIP-Seq extraction1_seq1 aliquote 1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer
Where can I get the processing logs?
Read processing pipeline
log
dm3
Number of total reads
21988686
Reads aligned (%)
62.4
Duplicates removed (%)
26.9
Number of peaks
6279 (qval < 1E-05)
dm6
Number of total reads
21988686
Reads aligned (%)
62.3
Duplicates removed (%)
27.0
Number of peaks
6212 (qval < 1E-05)
Base call quality data from
DBCLS SRA