SRX043970
GSM677646: Snyder N2 POLII L4 rep2 extraction2 seq1 aliquote 2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Larvae
Cell type
L4
NA
NA

Attributes by original data submitter

Sample

source_name
Snyder_N2_POLII_L4_rep2 extraction2_seq1 channel_2
strain
N2(genotype : wild type genotype : DR subclone of DB original (Tc1 pattern I) official name : N2 )
developmental stage
L4
genotype
wild type
Sex
hermaphrodite

Sequenced DNA Library

library_name
GSM677646: Snyder_N2_POLII_L4_rep2 extraction2_seq1 aliquote 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads
2798572
Reads aligned (%)
62.7
Duplicates removed (%)
11.6
Number of peaks
1704 (qval < 1E-05)

ce10

Number of total reads
2798572
Reads aligned (%)
62.6
Duplicates removed (%)
11.6
Number of peaks
1702 (qval < 1E-05)

Base call quality data from DBCLS SRA