Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Trl

Cell type

Cell type Class
Pupae
Cell type
White prepupae
NA
NA

Attributes by original data submitter

Sample

source_name
WPP
developmental stage
WPP
antibody name
KW3-Trl-D2
manufacturer
White Lab
catalog
N/A
fly type
iso1 (y; bw cn sp)

Sequenced DNA Library

library_name
GSM669543: WPP_KW3-Trl-D2_ChIPSeq_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

dm3

Number of total reads
28452363
Reads aligned (%)
16.9
Duplicates removed (%)
81.0
Number of peaks
8250 (qval < 1E-05)

dm6

Number of total reads
28452363
Reads aligned (%)
14.5
Duplicates removed (%)
83.6
Number of peaks
5770 (qval < 1E-05)

Base call quality data from DBCLS SRA