Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Blood
Cell type
Th2 Cells
MeSH Description
A subset of helper-inducer T-lymphocytes which synthesize and secrete the INTERLEUKINS IL-4; IL-5; IL-6; and IL-10. These cytokines influence B-cell development and antibody production as well as augmenting humoral responses.

Attributes by original data submitter

Sample

source_name
T-helper 2 cells
strain
C57BL/6
genotype/variation
WT
cell type
T-helper 2 cells
antibody
anti-H3K27me3

Sequenced DNA Library

library_name
GSM654878: Th2-WT-H2K37me3 [Methyl-Seq]
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
25105479
Reads aligned (%)
96.5
Duplicates removed (%)
60.9
Number of peaks
864 (qval < 1E-05)

mm9

Number of total reads
25105479
Reads aligned (%)
96.5
Duplicates removed (%)
60.9
Number of peaks
846 (qval < 1E-05)

Base call quality data from DBCLS SRA