SRX038996
Ct3 H3K4me3 ChIPseq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

Sequenced DNA Library

library_name
Ct3 H3K4me3 ChIPseq lib
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
12073792
Reads aligned (%)
71.5
Duplicates removed (%)
4.7
Number of peaks
18201 (qval < 1E-05)

hg19

Number of total reads
12073792
Reads aligned (%)
71.0
Duplicates removed (%)
5.5
Number of peaks
18230 (qval < 1E-05)

Base call quality data from DBCLS SRA