Antigen

Antigen Class

RNA polymerase

Antigen

RNA polymerase II

Cell type

Cell type Class

Blood

Cell type

Hematopoietic Stem Cells

MeSH Description

Progenitor cells from which all blood cells derived. They are found primarily in the bone marrow and also in small numbers in the peripheral blood.

Sample

source_name

Hematopoietic Stem & Progenitor Cells, RNA Pol II ChIP

chip antibody

RNA Pol II

antibody vendor

Covance

antibody catalog number

8WG16

cell type

CD133+ expanded umbilical cord blood (UCB) cells

cell number

1 million

biological replicate

1

Sequenced DNA Library

library_name

GSM638319: RNAP2 ChIP-Seq in HSPC, run 1

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

15585037

Reads aligned (%)

37.2

Duplicates removed (%)

55.5

Number of peaks

90 (qval < 1E-05)

hg19

Number of total reads

15585037

Reads aligned (%)

36.9

Duplicates removed (%)

56.9

Number of peaks

107 (qval < 1E-05)