SRX038777
GSM654638: hDot1L ChIP-seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
DOT1L

Cell type

Cell type Class
Pluripotent stem cell
Cell type
NCCIT
Primary Tissue
Testis
Tissue Diagnosis
Teratoma

Attributes by original data submitter

Sample

source_name
NCCIT
cell type
embryonic carcinoma cell line
cell line
NCCIT
antibody
hDot1L
antibody manufacturer
Abcam

Sequenced DNA Library

library_name
GSM654638: hDot1L_ChIP-seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
27806911
Reads aligned (%)
91.0
Duplicates removed (%)
9.0
Number of peaks
827 (qval < 1E-05)

hg19

Number of total reads
27806911
Reads aligned (%)
90.4
Duplicates removed (%)
10.3
Number of peaks
818 (qval < 1E-05)

Base call quality data from DBCLS SRA