Antigen

Antigen Class

Histone

Antigen

H3K36me3

Cell type

Cell type Class

Blood

Cell type

GM12878

Tissue

blood

Lineage

mesoderm

Description

B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus

Sample

source_name

cultured GM12878 cells

chip antibody

H3K36me3

antibody manufacturer

Abcam

antibody catalog number

ab9050

cell line

GM12878

Sequenced DNA Library

library_name

GSM646320: GM12878_H3K36me3_rep1

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

22357201

Reads aligned (%)

68.7

Duplicates removed (%)

6.8

Number of peaks

166 (qval < 1E-05)

hg19

Number of total reads

22357201

Reads aligned (%)

68.1

Duplicates removed (%)

7.5

Number of peaks

223 (qval < 1E-05)