SRX037946
GSM651552: CD34 WT Brg1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
SMARCA4

Cell type

Cell type Class
Blood
Cell type
CD34+
NA
NA

Attributes by original data submitter

Sample

source_name
CD34
condition
CD34 WT
antibody
Anti-Brg1 (Khavari, P. A., et al., 1993, Nature, 366:170-174)

Sequenced DNA Library

library_name
GSM651552: CD34_WT_Brg1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
11499981
Reads aligned (%)
71.7
Duplicates removed (%)
9.5
Number of peaks
4318 (qval < 1E-05)

hg19

Number of total reads
11499981
Reads aligned (%)
71.2
Duplicates removed (%)
9.8
Number of peaks
4324 (qval < 1E-05)

Base call quality data from DBCLS SRA