Antigen

Antigen Class

DNase-seq

Antigen

DNase-Seq

Cell type

Cell type Class

Blood

Cell type

K-562

Primary Tissue

Blood

Tissue Diagnosis

Leukemia Chronic Myelogenous

Sample

source_name

K562

biomaterial_provider

ATCC

cell

K562

cell organism

Human

cell description

leukemia

cell karyotype

cancer

cell lineage

"The continuous cell line K-562 was established by Lozzio and Lozzio from the pleural effusion of a 53-year-old female with chronic myelogenous leukemia in terminal blast crises." - ATCC

cell sex

F

Sequenced DNA Library

library_name

GSM646567: Stam_K562

library_strategy

DNase-Hypersensitivity

library_source

GENOMIC

library_selection

DNase

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

268452588

Reads aligned (%)

95.0

Duplicates removed (%)

61.1

Number of peaks

122281 (qval < 1E-05)

hg19

Number of total reads

268452588

Reads aligned (%)

94.3

Duplicates removed (%)

62.3

Number of peaks

125115 (qval < 1E-05)