Antigen

Antigen Class

Histone

Antigen

H3K27me3

Cell type

Cell type Class

Breast

Cell type

Breast cells

NA

NA

Sample

source_name

reduction mammoplasty

tissue

breast

cell type

epithelial cell

disease state

normal

cell marker

CD24+

cell purification antibody vendor

BD-Pharmingen

cell purification antibody catalog number

555426

chip antibody

H3K27me3

antibody vendor

Millipore

antibody catalog number

07-449

Sequenced DNA Library

library_name

GSM641825: H3K27me3_sample3_CD24+

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer

hg38

Number of total reads

7079884

Reads aligned (%)

38.9

Duplicates removed (%)

2.6

Number of peaks

38 (qval < 1E-05)

hg19

Number of total reads

7079884

Reads aligned (%)

38.6

Duplicates removed (%)

3.1

Number of peaks

42 (qval < 1E-05)