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Install and launch IGV before selecting data to visualize
For mm10
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For mm9
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For mm10
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For mm9
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For mm10
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For mm9
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: Tal1
wikigenes
PDBj
CellType: Hematopoietic progenitors
ATCC
MeSH
RIKEN BRC
SRX035991
GSM641910: Lin- Scl/Tal1 ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
Tal1
Cell type
Cell type Class
Blood
Cell type
Hematopoietic progenitors
NA
NA
Attributes by original data submitter
Sample
source_name
Bone marrow hematopoietic progenitor cells enriched by depletion of Lin+ cells
cell type
Lin- bone marrow hematopoietic progenitor cells
antibody
anti-Scl/Tal1
Sequenced DNA Library
library_name
GSM641910: Lin- Scl/Tal1 ChIP-Seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer
Where can I get the processing logs?
Read processing pipeline
log
mm10
Number of total reads
16742337
Reads aligned (%)
82.3
Duplicates removed (%)
19.9
Number of peaks
9995 (qval < 1E-05)
mm9
Number of total reads
16742337
Reads aligned (%)
82.2
Duplicates removed (%)
20.0
Number of peaks
10026 (qval < 1E-05)
Base call quality data from
DBCLS SRA