SRX034870
ChIP-Seq GR of DEX treated AtT-20 mouse sample replicate 3

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

Sequenced DNA Library

library_name
mATT20-DS9343-pDEX-ChIP
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
19409227
Reads aligned (%)
54.8
Duplicates removed (%)
10.6
Number of peaks
2806 (qval < 1E-05)

mm9

Number of total reads
19409227
Reads aligned (%)
54.7
Duplicates removed (%)
10.8
Number of peaks
2802 (qval < 1E-05)

Base call quality data from DBCLS SRA