SRX034863
ChIP-Seq GR of DEX treated 3134 mouse sample replicate 4

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

Sequenced DNA Library

library_name
m3134-DS9245-pDEX-ChIP-1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
9049924
Reads aligned (%)
82.0
Duplicates removed (%)
8.6
Number of peaks
11674 (qval < 1E-05)

mm9

Number of total reads
9049924
Reads aligned (%)
81.9
Duplicates removed (%)
9.0
Number of peaks
11759 (qval < 1E-05)

Base call quality data from DBCLS SRA