SRX032892
GSM634631: Human Adipocytes Input rep1 (GAII)

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Adipocyte
Cell type
SGBS
NA
NA

Attributes by original data submitter

Sample

source_name
Human Adipocytes
cell type
Simpson Golabi Behmel Syndrome (SGBS) human adi- pocytes
chip antibody
None

Sequenced DNA Library

library_name
GSM634631: Human_Adipocytes_Input_rep1 (GAII)
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
27578904
Reads aligned (%)
98.6
Duplicates removed (%)
55.9
Number of peaks
630 (qval < 1E-05)

hg19

Number of total reads
27578904
Reads aligned (%)
97.8
Duplicates removed (%)
57.7
Number of peaks
811 (qval < 1E-05)

Base call quality data from DBCLS SRA