Antigen

Antigen Class

TFs and others

Antigen

Foxa2

Cell type

Cell type Class

Liver

Cell type

Liver

MeSH Description

A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Sample

source_name

Homogenized Mouse Liver

strain

CD1

cell type

Liver tissue

chip antibody

FOXA2

antibody provider

Dr. Jeffrey Whitsett

antibody reference

Gene Expr Patterns. 2004 Dec;5(2):193-208. Immunohistochemical localization of Foxa1 and Foxa2 in mouse embryos and adult tissues. Besnard V, Wert SE, Hull WM, Whitsett JA.

Sequenced DNA Library

library_name

GSM634623: Mouse_Liver_FOXA2_rep3 (GAII)

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

mm10

Number of total reads

11114594

Reads aligned (%)

89.1

Duplicates removed (%)

41.1

Number of peaks

603 (qval < 1E-05)

mm9

Number of total reads

11114594

Reads aligned (%)

88.9

Duplicates removed (%)

41.5

Number of peaks

685 (qval < 1E-05)