Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Neural
Cell type
Neurons
MeSH Description
The basic cellular units of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the NERVOUS SYSTEM.

Attributes by original data submitter

Sample

source_name
Terminally differentiated Neurons (TN)
strain
129Sv-C57Bl/6
genotype/variation
wild type
cell type
Terminally differentiated Neurons (TN)
chip antibody
anti-RNA Pol II

Sequenced DNA Library

library_name
GSM632059: TN_PolII [ChIP-Seq]
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
14563923
Reads aligned (%)
60.5
Duplicates removed (%)
33.8
Number of peaks
7510 (qval < 1E-05)

mm9

Number of total reads
14563923
Reads aligned (%)
60.4
Duplicates removed (%)
34.1
Number of peaks
7430 (qval < 1E-05)

Base call quality data from DBCLS SRA