Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Neural
Cell type
Neurons
MeSH Description
The basic cellular units of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the NERVOUS SYSTEM.

Attributes by original data submitter

Sample

source_name
Terminally differentiated Neurons (TN)
strain
129Sv-C57Bl/6
genotype/variation
wild type
cell type
Terminally differentiated Neurons (TN)
chip antibody
anti-H3K27me3

Sequenced DNA Library

library_name
GSM632053: TN_H3K27me3_biological_replicate_b1 [ChIP-Seq]
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
11468732
Reads aligned (%)
77.5
Duplicates removed (%)
50.3
Number of peaks
458 (qval < 1E-05)

mm9

Number of total reads
11468732
Reads aligned (%)
77.3
Duplicates removed (%)
50.6
Number of peaks
482 (qval < 1E-05)

Base call quality data from DBCLS SRA