Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Trl

Cell type

Cell type Class
Embryo
Cell type
8-16h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E8-16h
developmental stage
E8-16h
antibody name
KW3-Trl-D2
manufacturer
White Lab
catalog
N/A

Sequenced DNA Library

library_name
GSM628226: KW3-Trl-D2_ChIPSeq_1 and 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

dm3

Number of total reads
38069331
Reads aligned (%)
39.7
Duplicates removed (%)
59.7
Number of peaks
11666 (qval < 1E-05)

dm6

Number of total reads
38069331
Reads aligned (%)
37.9
Duplicates removed (%)
61.4
Number of peaks
10798 (qval < 1E-05)

Base call quality data from DBCLS SRA