SRX031906
GSM628027: pHANEzh1 Ezh1i PolII 8WG16 ChIPSeq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Muscle
Cell type
C2C12
Primary Tissue
Skeletal Muscle
Tissue Diagnosis
NOS

Attributes by original data submitter

Sample

source_name
C2C12 myoblasts
strain
C3H
developmental stage
6-hours differentiated Myotubes

Sequenced DNA Library

library_name
GSM628027: pHANEzh1_Ezh1i_PolII_8WG16_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
27182291
Reads aligned (%)
96.3
Duplicates removed (%)
8.4
Number of peaks
6731 (qval < 1E-05)

mm9

Number of total reads
27182291
Reads aligned (%)
96.2
Duplicates removed (%)
8.5
Number of peaks
6826 (qval < 1E-05)

Base call quality data from DBCLS SRA