SRX031214
GSM616971: Mec input

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Breast
Cell type
Mammary epithelial cells
NA
NA

Attributes by original data submitter

Sample

source_name
mammary epithelial cells
strain
CD-1
cell type
mammary epithelial cell
developmental stage
12 week virgin-diestrus
gender
female
antibody
N/A
antibody vendor
N/A

Sequenced DNA Library

library_name
GSM616971: Mec_input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
11873680
Reads aligned (%)
93.8
Duplicates removed (%)
8.7
Number of peaks
255 (qval < 1E-05)

mm9

Number of total reads
11873680
Reads aligned (%)
93.6
Duplicates removed (%)
8.9
Number of peaks
296 (qval < 1E-05)

Base call quality data from DBCLS SRA