Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Liver
Cell type
Liver
MeSH Description
A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Attributes by original data submitter

Sample

source_name
liver
strain
CD-1
tissue type
liver
developmental stage
lactation day 8
gender
female
antibody
H3K27Me3
antibody vendor
millipore

Sequenced DNA Library

library_name
GSM616949: Lvr_H3K27Me3_rep2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
21377910
Reads aligned (%)
97.7
Duplicates removed (%)
13.3
Number of peaks
430 (qval < 1E-05)

mm9

Number of total reads
21377910
Reads aligned (%)
97.6
Duplicates removed (%)
13.3
Number of peaks
432 (qval < 1E-05)

Base call quality data from DBCLS SRA