Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Crebbp

Cell type

Cell type Class
Blood
Cell type
Hematopoietic Stem Cells
MeSH Description
Progenitor cells from which all blood cells derived. They are found primarily in the bone marrow and also in small numbers in the peripheral blood.

Attributes by original data submitter

Sample

source_name
BM-HPC cell line
strain
C57BL/6-cast
cell line
BM-HPC
cell type
Hematopoietic progenitor/stem cell line derived from Mouse bone marrow
antibody
rabbit polyclonal Cbp antibody

Sequenced DNA Library

library_name
GSM621794: BM-HPC_Cbp
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
14938616
Reads aligned (%)
86.4
Duplicates removed (%)
11.9
Number of peaks
504 (qval < 1E-05)

mm9

Number of total reads
14938616
Reads aligned (%)
86.2
Duplicates removed (%)
12.0
Number of peaks
579 (qval < 1E-05)

Base call quality data from DBCLS SRA