SRX030962
GSM621132: ECR-WPP+12 GFP ChIPSeq 1 and 2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
GFP

Cell type

Cell type Class
Pupae
Cell type
White prepupae
NA
NA

Attributes by original data submitter

Sample

source_name
ECR-WPP+12
developmental stage
ECR-WPP+12
antibody name
GFP
manufacturer
White Lab
catalog
Custom

Sequenced DNA Library

library_name
GSM621132: ECR-WPP+12_GFP_ChIPSeq_1 and 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
23668240
Reads aligned (%)
74.0
Duplicates removed (%)
79.0
Number of peaks
2844 (qval < 1E-05)

dm3

Number of total reads
23668240
Reads aligned (%)
77.9
Duplicates removed (%)
75.2
Number of peaks
5293 (qval < 1E-05)

Base call quality data from DBCLS SRA