SRX030960
GSM621130: E16-24h GFP ChIPSeq 1 and 2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
GFP

Cell type

Cell type Class
Embryo
Cell type
16-24h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E16-24h
developmental stage
E16-24h
antibody name
GFP
manufacturer
White Lab
catalog
Custom

Sequenced DNA Library

library_name
GSM621130: E16-24h_GFP_ChIPSeq_1 and 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
53679011
Reads aligned (%)
95.2
Duplicates removed (%)
34.9
Number of peaks
0 (qval < 1E-05)

dm3

Number of total reads
53679011
Reads aligned (%)
95.5
Duplicates removed (%)
33.0
Number of peaks
0 (qval < 1E-05)

Base call quality data from DBCLS SRA