Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Psc

Cell type

Cell type Class
Cell line
Cell type
S2-DRSC
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
DRSC-S2 cell line
cell line
DRSC-S2
chip antibody
Psc

Sequenced DNA Library

library_name
GSM604728: S2-DRSC-ChIP-Psc replicate 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

dm3

Number of total reads
19920468
Reads aligned (%)
65.4
Duplicates removed (%)
23.2
Number of peaks
6600 (qval < 1E-05)

dm6

Number of total reads
19920468
Reads aligned (%)
62.7
Duplicates removed (%)
26.2
Number of peaks
6081 (qval < 1E-05)

Base call quality data from DBCLS SRA