SRX027483
GSM602292: ESC input

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
hESC H9
NA
NA

Attributes by original data submitter

Sample

source_name
Human embryonic stem cells
cell line
H9 ESC
chip antibody
input

Sequenced DNA Library

library_name
GSM602292: ESC_input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
21189139
Reads aligned (%)
83.5
Duplicates removed (%)
3.6
Number of peaks
226 (qval < 1E-05)

hg19

Number of total reads
21189139
Reads aligned (%)
83.4
Duplicates removed (%)
3.8
Number of peaks
305 (qval < 1E-05)

Base call quality data from DBCLS SRA